beginner⏱️ 14-24 minutes📅 Updated August 2026

Step-by-step guide to integrate AgentMode MCP server with Sourcegraph Cody. Includes database_query and github_operations.

AgentMode + Sourcegraph Cody: Complete MCP Integration

AgentMode is a MCP server that Connect to dozens of databases, data warehouses, Github & more, from a single MCP server. Run the Docker image locally, in the cloud, or on-premise..

When integrated with Sourcegraph Cody, you can:

  • Execute SQL queries across connected databases
  • Interact with GitHub repositories and issues
  • Connect to data warehouses like Snowflake, BigQuery

This guide provides step-by-step instructions to set up AgentMode in Sourcegraph Cody, including configuration, examples, and troubleshooting.

What You'll Achieve

After completing this setup:

  • AgentMode will be fully integrated and operational
  • You can use AgentMode tools directly in Sourcegraph Cody
  • All AgentMode capabilities will be available for your workflows
  • Access to 3 different tools

Prerequisites

Before starting, ensure you have:

  • API key from AgentMode dashboard
  • Workspace identifier
  • Sourcegraph Cody installed and configured
  • Compatible operating system (VS Code Extension, JetBrains Extension)

Installation

Step 1: Install AgentMode

Configuration

Step 2: Configure Sourcegraph Cody

  1. Open Sourcegraph Cody settings
  2. Navigate to MCP server configuration
  3. Add AgentMode server with appropriate settings
  4. Save and restart if needed

Examples

Once configured, you can use AgentMode in Sourcegraph Cody:

Multi-Database Analytics

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Ask Sourcegraph Cody: "Show me user engagement metrics from both databases"

Expected Result: undefined

GitHub Issue Management

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Ask Sourcegraph Cody: "Create issues for users with failed payments"

Expected Result: undefined

Data Pipeline Monitoring

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Ask Sourcegraph Cody: "Check status of yesterday's data pipeline runs"

Expected Result: undefined

Testing Your Setup

  1. Launch Sourcegraph Cody
  2. Verify AgentMode is available in the tools list
  3. Test basic AgentMode functionality

Troubleshooting

Common Issues

Tools Not Available

Symptoms: Cody does not see the connected tools

Cause: Incorrect config path or JSON syntax error

Solution:

  • Verify path is exactly ~/.config/cody/mcp_servers.json
  • Check JSON validity
  • Check Cody output logs in VS Code Output panel

AgentMode not appearing in Sourcegraph Cody

Symptoms: Server not listed, Tools not available

Cause: Configuration or installation issue

Solution:

  • Verify configuration syntax
  • Check AgentMode installation
  • Restart Sourcegraph Cody
  • Check logs for error messages

Next Steps

Now that AgentMode is integrated with Sourcegraph Cody:

  • Explore all AgentMode capabilities through Sourcegraph Cody
  • Check out other MCP servers that work with Sourcegraph Cody
  • Join the MCP community for tips and support
  • Consider contributing to AgentMode development

Need Help?

Related Resources

More Integrations

Explore other MCP servers that work with Sourcegraph Cody

Need Help?

Join the MCP community for support and discussions

AgentMode + Sourcegraph Cody: MCP Setup Guide (2026)